Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate transport system substrate-binding protein | SAMN05444679_11475 | Not Available | Negative | 3955261 - 3956289 | 37412.4 |
| fe-s cluster biosynthesis and repair protein yggx | SAMN05444679_11476 | Not Available | Positive | 3956419 - 3956691 | 10280.3 |
| trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein | SAMN05444679_11477 | Not Available | Positive | 3956707 - 3958584 | 67236.9 |
| hypothetical protein | SAMN05444679_11478 | Not Available | Negative | 3958560 - 3961778 | 118715.0 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN05444679_11479 | Not Available | Positive | 3961894 - 3962793 | 33074.2 |
| lysr family transcriptional regulator, chromosome initiation inhibitor | SAMN05444679_11480 | Not Available | Negative | 3963029 - 3963952 | 32951.8 |
| l-lysine exporter family protein lyse/argo | SAMN05444679_11481 | Not Available | Positive | 3964023 - 3964664 | 21890.4 |
| enoyl-coa hydratase | SAMN05444679_11482 | Not Available | Negative | 3964647 - 3965576 | 34069.7 |
| hemolysin iii | SAMN05444679_11483 | Not Available | Positive | 3965772 - 3966386 | 22032.2 |
| mfs transporter, putative metabolite:h+ symporter | SAMN05444679_11484 | Not Available | Positive | 3966459 - 3968075 | 56024.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
