Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, xre-family hth domain | SAMN05444679_11455 | Not Available | Negative | 3939407 - 3939709 | 10653.9 |
| hypothetical protein | SAMN05444679_11456 | Not Available | Positive | 3939912 - 3940604 | 25294.7 |
| disulfide bond formation protein dsbb | SAMN05444679_11457 | Not Available | Negative | 3940574 - 3941098 | 18819.5 |
| sulfate transport system atp-binding protein | SAMN05444679_11458 | Not Available | Negative | 3941095 - 3942189 | 40602.6 |
| sulfate transport system permease protein | SAMN05444679_11459 | Not Available | Negative | 3942202 - 3943107 | 32628.4 |
| sulfate transport system permease protein | SAMN05444679_11460 | Not Available | Negative | 3943104 - 3943994 | 31476.5 |
| sulfate transport system substrate-binding protein | SAMN05444679_11461 | Not Available | Negative | 3944081 - 3945082 | 35821.6 |
| hypothetical protein | SAMN05444679_11462 | Not Available | Negative | 3945079 - 3945651 | 20582.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_11463 | Not Available | Negative | 3945850 - 3946764 | 32948.2 |
| fmn-dependent nadh-azoreductase | SAMN05444679_11464 | Not Available | Positive | 3946899 - 3947546 | 22769.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
