Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine aminopeptidase, type i | SAMN05444679_11445 | Not Available | Positive | 3925273 - 3926097 | 29701.5 |
| utp--glnb (protein pii) uridylyltransferase, glnd | SAMN05444679_11446 | Not Available | Positive | 3926124 - 3928712 | 97337.3 |
| putative oxidoreductase | SAMN05444679_11447 | Not Available | Positive | 3928803 - 3929207 | 14162.0 |
| peptide deformylase | SAMN05444679_11448 | Not Available | Negative | 3929226 - 3929765 | 19907.9 |
| hypothetical protein | SAMN05444679_11449 | Not Available | Negative | 3929800 - 3930234 | 15283.2 |
| dna ligase (nad+) | SAMN05444679_11450 | Not Available | Negative | 3930336 - 3932414 | 75728.4 |
| zipa, c-terminal ftsz-binding domain | SAMN05444679_11451 | Not Available | Negative | 3932533 - 3933633 | 38980.0 |
| condensin subunit smc | SAMN05444679_11452 | Not Available | Negative | 3933647 - 3937162 | 130046.0 |
| hypothetical protein | SAMN05444679_11453 | Not Available | Positive | 3937280 - 3938029 | 27647.0 |
| serine/threonine-protein kinase hipa | SAMN05444679_11454 | Not Available | Negative | 3938037 - 3939410 | 50242.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
