Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444679_11435 | Not Available | Negative | 3912462 - 3913409 | 33635.5 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_11436 | Not Available | Negative | 3913508 - 3914746 | 44929.8 |
| fatty-acyl-coa synthase | SAMN05444679_11437 | Not Available | Negative | 3914912 - 3916555 | 59875.1 |
| transcriptional regulator, tetr family | SAMN05444679_11438 | Not Available | Positive | 3916648 - 3917358 | 26380.1 |
| uncharacterized conserved protein ydiu, upf0061 family | SAMN05444679_11439 | Not Available | Positive | 3917524 - 3919005 | 54256.2 |
| peptide-methionine (r)-s-oxide reductase | SAMN05444679_11440 | Not Available | Positive | 3919002 - 3919418 | 15109.7 |
| intracellular septation protein | SAMN05444679_11441 | Not Available | Positive | 3919434 - 3919973 | 20258.5 |
| bola protein | SAMN05444679_11442 | Not Available | Positive | 3919970 - 3920233 | 9302.2 |
| peptidyl-prolyl cis-trans isomerase c | SAMN05444679_11443 | Not Available | Positive | 3920281 - 3921063 | 28864.7 |
| phosphoribosylformylglycinamidine synthase | SAMN05444679_11444 | Not Available | Negative | 3921129 - 3925226 | 146162.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
