Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, iclr family | SAMN05444679_113210 | Not Available | Negative | 3875230 - 3876054 | 28855.8 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444679_113211 | Not Available | Positive | 3876176 - 3877135 | 35431.1 |
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN05444679_113212 | Not Available | Positive | 3877173 - 3878840 | 61321.5 |
| protein of unknown function | SAMN05444679_113213 | Not Available | Positive | 3878861 - 3879055 | 7012.37 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_113214 | Not Available | Positive | 3879105 - 3880061 | 33228.1 |
| homogentisate 1,2-dioxygenase | SAMN05444679_113215 | Not Available | Positive | 3880072 - 3880307 | 8884.28 |
| type iii secretion protein t | SAMN05444679_1141 | Not Available | Negative | 3880399 - 3881181 | 28180.3 |
| hypothetical protein | SAMN05444679_1142 | Not Available | Negative | 3881193 - 3881678 | 17840.9 |
| atp synthase in type iii secretion protein n | SAMN05444679_1143 | Not Available | Negative | 3881675 - 3883039 | 47962.1 |
| type iii secretion protein l | SAMN05444679_1144 | Not Available | Negative | 3883039 - 3883677 | 23069.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
