Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN05444679_113200 | Not Available | Positive | 3867061 - 3867774 | 24518.3 |
| [ssu ribosomal protein s18p]-alanine acetyltransferase | SAMN05444679_113201 | Not Available | Positive | 3867771 - 3868358 | 21242.5 |
| dna polymerase | SAMN05444679_113202 | Not Available | Positive | 3868355 - 3869092 | 25684.1 |
| orotidine-5'-phosphate decarboxylase | SAMN05444679_113203 | Not Available | Positive | 3869125 - 3869949 | 29547.3 |
| uncharacterized conserved protein, duf1800 family | SAMN05444679_113204 | Not Available | Positive | 3870137 - 3871969 | 65292.3 |
| uncharacterized conserved protein, duf1501 family | SAMN05444679_113205 | Not Available | Positive | 3871981 - 3873447 | 51173.7 |
| uncharacterized conserved protein | SAMN05444679_113206 | Not Available | Positive | 3873524 - 3873871 | 12924.6 |
| thioesterase domain-containing protein, putative | SAMN05444679_113207 | Not Available | Positive | 3873868 - 3874320 | 16115.6 |
| uncharacterized conserved protein | SAMN05444679_113208 | Not Available | Positive | 3874372 - 3874896 | 19052.9 |
| uncharacterized membrane protein yeaq/ymge, transglycosylase-associated protein family | SAMN05444679_113209 | Not Available | Positive | 3874972 - 3875217 | 7886.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
