Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein hslj | SAMN05444679_113190 | Not Available | Negative | 3857075 - 3857515 | 15385.1 |
| serine/threonine-protein kinase hipa | SAMN05444679_113191 | Not Available | Negative | 3857573 - 3858493 | 33618.5 |
| helix-turn-helix | SAMN05444679_113192 | Not Available | Negative | 3858958 - 3859254 | 10581.8 |
| thioredoxin | SAMN05444679_113193 | Not Available | Negative | 3859388 - 3860308 | 33990.5 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN05444679_113194 | Not Available | Positive | 3860345 - 3860887 | 18402.4 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | SAMN05444679_113195 | Not Available | Positive | 3860884 - 3862077 | 42205.4 |
| translation factor sua5 | SAMN05444679_113196 | Not Available | Positive | 3862083 - 3863084 | 34623.6 |
| secretory lipase | SAMN05444679_113197 | Not Available | Negative | 3863095 - 3864435 | 46102.3 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN05444679_113198 | Not Available | Negative | 3864554 - 3865993 | 50853.3 |
| eama-like transporter family protein | SAMN05444679_113199 | Not Available | Positive | 3866069 - 3867064 | 34362.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
