Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | SAMN05444679_113180 | Not Available | Positive | 3843772 - 3844965 | 41281.9 |
| pyruvate kinase | SAMN05444679_113181 | Not Available | Positive | 3845027 - 3846475 | 51896.9 |
| fructose-bisphosphate aldolase | SAMN05444679_113182 | Not Available | Positive | 3846691 - 3847755 | 38627.4 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMN05444679_113183 | Not Available | Positive | 3847852 - 3848757 | 32789.4 |
| dna-binding transcriptional regulator, csgd family | SAMN05444679_113184 | Not Available | Positive | 3848868 - 3849533 | 24348.9 |
| transcriptional regulator, crp/fnr family | SAMN05444679_113185 | Not Available | Positive | 3849575 - 3850237 | 24271.4 |
| peptide/nickel transport system substrate-binding protein | SAMN05444679_113186 | Not Available | Negative | 3850253 - 3851848 | 59322.1 |
| subtilase family protein | SAMN05444679_113187 | Not Available | Negative | 3851885 - 3853882 | 72533.4 |
| pap2 superfamily protein | SAMN05444679_113188 | Not Available | Negative | 3853901 - 3855004 | 40060.0 |
| tolb amino-terminal domain-containing protein | SAMN05444679_113189 | Not Available | Negative | 3855044 - 3856849 | 64268.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
