Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | SAMN05444679_113170 | Not Available | Positive | 3835198 - 3836148 | 33148.9 |
| predicted branched-chain amino acid permease (azaleucine resistance) | SAMN05444679_113171 | Not Available | Positive | 3836148 - 3836888 | 26649.0 |
| branched-chain amino acid transport protein | SAMN05444679_113172 | Not Available | Positive | 3836885 - 3837235 | 12546.5 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_113173 | Not Available | Negative | 3837236 - 3838207 | 34432.0 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444679_113174 | Not Available | Negative | 3838236 - 3839198 | 34978.6 |
| protein of unknown function | SAMN05444679_113175 | Not Available | Negative | 3839195 - 3839374 | 6407.54 |
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN05444679_113176 | Not Available | Negative | 3839371 - 3841014 | 59957.2 |
| hypothetical protein | SAMN05444679_113177 | Not Available | Negative | 3841023 - 3842144 | 40766.4 |
| catechol 2,3-dioxygenase | SAMN05444679_113178 | Not Available | Negative | 3842137 - 3842670 | 19844.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_113179 | Not Available | Positive | 3842764 - 3843675 | 33530.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
