Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine synthase a | SAMN05444679_101368 | Not Available | Negative | 350860 - 351930 | 38514.7 |
| cytochrome c biogenesis protein ccda | SAMN05444679_101369 | Not Available | Negative | 351958 - 353745 | 63316.3 |
| signal transduction histidine kinase | SAMN05444679_101370 | Not Available | Negative | 353771 - 355087 | 47942.7 |
| peroxiredoxin, ohr subfamily | SAMN05444679_101371 | Not Available | Negative | 355111 - 355530 | 14444.2 |
| two-component system, ompr family, response regulator | SAMN05444679_101372 | Not Available | Positive | 355719 - 356459 | 27892.0 |
| thiol-disulfide isomerase or thioredoxin | SAMN05444679_101373 | Not Available | Negative | 356592 - 357152 | 20739.8 |
| hypothetical protein | SAMN05444679_101374 | Not Available | Negative | 357176 - 357634 | 16378.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_101375 | Not Available | Positive | 357856 - 358869 | 36956.1 |
| predicted metal-binding integral membrane protein | SAMN05444679_101376 | Not Available | Negative | 358889 - 359104 | 7198.33 |
| transcriptional regulator, lysr family | SAMN05444679_101377 | Not Available | Negative | 359255 - 360175 | 34084.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
