Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| geranylgeranyl reductase family | SAMN05444679_113150 | Not Available | Positive | 3812492 - 3813724 | 43315.7 |
| hypothetical protein | SAMN05444679_113151 | Not Available | Positive | 3813836 - 3814351 | 17908.9 |
| cytochrome c oxidase subunit 2 | SAMN05444679_113152 | Not Available | Positive | 3814397 - 3815551 | 41791.7 |
| cytochrome c oxidase subunit 1 | SAMN05444679_113153 | Not Available | Positive | 3815548 - 3817344 | 66269.1 |
| cytochrome c oxidase subunit 3 | SAMN05444679_113154 | Not Available | Positive | 3817341 - 3817955 | 21651.9 |
| cytochrome c oxidase subunit 3 | SAMN05444679_113155 | Not Available | Positive | 3817975 - 3818694 | 26275.4 |
| cytochrome c oxidase subunit iv | SAMN05444679_113156 | Not Available | Positive | 3818706 - 3819020 | 11714.1 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_113157 | Not Available | Negative | 3819031 - 3820662 | 58592.6 |
| dna-binding transcriptional regulator, lrp family | SAMN05444679_113158 | Not Available | Negative | 3820669 - 3821181 | 18618.5 |
| indolepyruvate ferredoxin oxidoreductase | SAMN05444679_113159 | Not Available | Positive | 3821360 - 3824965 | 130886.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
