Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05444679_113140 | Not Available | Positive | 3805394 - 3805852 | 16922.3 |
| hypothetical protein | SAMN05444679_113141 | Not Available | Positive | 3806064 - 3806282 | 8170.79 |
| putative hydrolase of the had superfamily | SAMN05444679_113142 | Not Available | Positive | 3806327 - 3806938 | 21735.1 |
| glycerophosphoryl diester phosphodiesterase | SAMN05444679_113143 | Not Available | Positive | 3807001 - 3808257 | 45796.4 |
| hypothetical protein | SAMN05444679_113144 | Not Available | Positive | 3808250 - 3808567 | 10322.2 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN05444679_113145 | Not Available | Negative | 3808507 - 3809337 | 29776.7 |
| methyltransferase domain-containing protein | SAMN05444679_113146 | Not Available | Negative | 3809341 - 3810153 | 29251.7 |
| uncharacterized osmc-related protein | SAMN05444679_113147 | Not Available | Positive | 3810398 - 3810931 | 18634.3 |
| arac-type dna-binding protein | SAMN05444679_113148 | Not Available | Positive | 3810931 - 3811920 | 35476.8 |
| polyketide cyclase / dehydrase and lipid transport | SAMN05444679_113149 | Not Available | Negative | 3811927 - 3812472 | 20139.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
