Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase beta subunit | SAMN05444679_113130 | Not Available | Positive | 3794570 - 3796126 | 55129.5 |
| formate dehydrogenase alpha subunit | SAMN05444679_113131 | Not Available | Positive | 3796147 - 3799011 | 104222.0 |
| fdhd protein | SAMN05444679_113132 | Not Available | Positive | 3799008 - 3799859 | 29686.6 |
| formate dehydrogenase delta subunit | SAMN05444679_113133 | Not Available | Positive | 3799879 - 3800130 | 8770.53 |
| hypothetical protein | SAMN05444679_113134 | Not Available | Negative | 3800147 - 3800422 | 9871.27 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05444679_113135 | Not Available | Positive | 3800532 - 3801434 | 30891.4 |
| uncharacterized conserved protein ygbk, duf1537 family | SAMN05444679_113136 | Not Available | Positive | 3801431 - 3802699 | 42968.8 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05444679_113137 | Not Available | Positive | 3802696 - 3803373 | 24650.6 |
| hydroxypyruvate isomerase | SAMN05444679_113138 | Not Available | Positive | 3803386 - 3804210 | 30810.7 |
| cytosine deaminase | SAMN05444679_113139 | Not Available | Positive | 3804207 - 3805397 | 42742.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
