Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-coa synthetase alpha subunit | SAMN05444679_113120 | Not Available | Positive | 3785960 - 3786859 | 31710.7 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444679_113121 | Not Available | Positive | 3786867 - 3787637 | 27518.2 |
| ketopantoate reductase | SAMN05444679_113122 | Not Available | Positive | 3787677 - 3788687 | 36006.7 |
| pyruvate kinase | SAMN05444679_113123 | Not Available | Positive | 3788698 - 3790116 | 50391.7 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_113124 | Not Available | Negative | 3790122 - 3790979 | 31266.1 |
| hypothetical protein | SAMN05444679_113125 | Not Available | Positive | 3791101 - 3791337 | 8364.16 |
| mfs transporter, ofa family, oxalate/formate antiporter | SAMN05444679_113126 | Not Available | Negative | 3791352 - 3792677 | 47249.0 |
| hypothetical protein | SAMN05444679_113127 | Not Available | Positive | 3792853 - 3792993 | 4852.98 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_113128 | Not Available | Negative | 3792990 - 3793919 | 34102.4 |
| formate dehydrogenase gamma subunit | SAMN05444679_113129 | Not Available | Positive | 3794061 - 3794573 | 18014.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
