Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter tctb family protein | SAMN05444679_113110 | Not Available | Positive | 3775781 - 3776305 | 18981.6 |
| putative tricarboxylic transport membrane protein | SAMN05444679_113111 | Not Available | Positive | 3776327 - 3777856 | 53943.0 |
| cytidylate kinase | SAMN05444679_113112 | Not Available | Positive | 3777875 - 3778711 | 30718.9 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444679_113113 | Not Available | Negative | 3778713 - 3779456 | 27970.9 |
| oxalyl-coa decarboxylase | SAMN05444679_113114 | Not Available | Positive | 3779476 - 3781263 | 62747.8 |
| formyl-coa transferase | SAMN05444679_113115 | Not Available | Positive | 3781289 - 3782551 | 46195.2 |
| pas domain s-box-containing protein | SAMN05444679_113116 | Not Available | Positive | 3782575 - 3783012 | 16117.3 |
| formyl-coa transferase | SAMN05444679_113117 | Not Available | Positive | 3783009 - 3784256 | 45407.4 |
| hypothetical protein | SAMN05444679_113118 | Not Available | Positive | 3784430 - 3784759 | 12938.2 |
| succinyl-coa synthetase (adp-forming) beta subunit | SAMN05444679_113119 | Not Available | Positive | 3784793 - 3785959 | 41532.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
