Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama-like transporter family protein | SAMN05444679_113100 | Not Available | Positive | 3764176 - 3764550 | 12902.4 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05444679_113101 | Not Available | Positive | 3764558 - 3765991 | 52067.1 |
| hypothetical protein | SAMN05444679_113102 | Not Available | Positive | 3766092 - 3767300 | 43415.0 |
| hypothetical protein | SAMN05444679_113103 | Not Available | Positive | 3767435 - 3769681 | 78236.1 |
| dna-binding transcriptional regulator, lrp family | SAMN05444679_113104 | Not Available | Negative | 3769694 - 3770167 | 17232.1 |
| pyruvate dehydrogenase e1 component | SAMN05444679_113105 | Not Available | Positive | 3770274 - 3772898 | 95267.0 |
| helix-turn-helix domain-containing protein | SAMN05444679_113106 | Not Available | Positive | 3772952 - 3773437 | 17353.9 |
| nucleotidyl transferase abieii toxin, type iv ta system | SAMN05444679_113107 | Not Available | Positive | 3773397 - 3774134 | 27254.1 |
| hypothetical protein | SAMN05444679_113108 | Not Available | Negative | 3774168 - 3774404 | 8282.92 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_113109 | Not Available | Positive | 3774648 - 3775679 | 36696.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
