Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_11390 | Not Available | Positive | 3748818 - 3749675 | 33619.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444679_11391 | Not Available | Positive | 3749729 - 3750655 | 34607.4 |
| rare lipoprotein a | SAMN05444679_11392 | Not Available | Negative | 3750660 - 3751688 | 36157.0 |
| glutamate-ammonia-ligase adenylyltransferase | SAMN05444679_11393 | Not Available | Negative | 3751681 - 3754440 | 103443.0 |
| tigr02099 family protein | SAMN05444679_11394 | Not Available | Positive | 3754466 - 3758581 | 146313.0 |
| nitrilase | SAMN05444679_11395 | Not Available | Positive | 3758609 - 3759424 | 29627.3 |
| pas/pac sensor signal transduction histidine kinase | SAMN05444679_11396 | Not Available | Positive | 3759421 - 3761499 | 76571.1 |
| two component transcriptional regulator, luxr family | SAMN05444679_11397 | Not Available | Positive | 3761510 - 3762133 | 23471.8 |
| outer membrane protein ompa | SAMN05444679_11398 | Not Available | Negative | 3762130 - 3762783 | 22303.3 |
| membrane-bound lytic murein transglycosylase a | SAMN05444679_11399 | Not Available | Positive | 3762826 - 3764130 | 46856.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
