Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_11379 | Not Available | Negative | 3739961 - 3740425 | 16746.4 |
| integral membrane protein, yjbe family | SAMN05444679_11380 | Not Available | Negative | 3740450 - 3741187 | 25866.8 |
| hypothetical protein | SAMN05444679_11382 | Not Available | Positive | 3741608 - 3742060 | 17014.7 |
| hypothetical protein | SAMN05444679_11383 | Not Available | Positive | 3742072 - 3742377 | 11395.7 |
| uncharacterized conserved protein yaeq, suppresses rfah defect | SAMN05444679_11384 | Not Available | Negative | 3742390 - 3742950 | 20599.7 |
| adenylosuccinate lyase | SAMN05444679_11385 | Not Available | Negative | 3742950 - 3744329 | 50493.8 |
| peptidase family m48 | SAMN05444679_11386 | Not Available | Negative | 3744366 - 3745433 | 38431.9 |
| uncharacterized membrane protein yjgn, duf898 family | SAMN05444679_11387 | Not Available | Negative | 3745430 - 3746584 | 41656.7 |
| glutathione s-transferase | SAMN05444679_11388 | Not Available | Positive | 3747208 - 3747819 | 22718.3 |
| glutathione peroxidase | SAMN05444679_11389 | Not Available | Negative | 3748089 - 3748688 | 21578.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
