Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05444679_101358 | Not Available | Positive | 339682 - 341154 | 51617.0 |
| membrane fusion protein, multidrug efflux system | SAMN05444679_101359 | Not Available | Positive | 341183 - 342502 | 46014.8 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05444679_101360 | Not Available | Positive | 342521 - 344083 | 55608.6 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444679_101361 | Not Available | Positive | 344251 - 345021 | 28138.2 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444679_101362 | Not Available | Positive | 345022 - 345732 | 25584.6 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_101363 | Not Available | Positive | 345755 - 346948 | 42435.6 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444679_101364 | Not Available | Positive | 346983 - 347858 | 31124.6 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444679_101365 | Not Available | Positive | 347871 - 348857 | 35008.2 |
| gluconolactonase | SAMN05444679_101366 | Not Available | Positive | 348860 - 349798 | 34932.0 |
| predicted secreted hydrolase | SAMN05444679_101367 | Not Available | Negative | 349814 - 350857 | 38873.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
