Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase | SAMN05444679_11359 | Not Available | Positive | 3717162 - 3718151 | 35531.5 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN05444679_11360 | Not Available | Positive | 3718164 - 3719318 | 41066.1 |
| hexapeptide repeat of succinyl-transferase | SAMN05444679_11361 | Not Available | Positive | 3719318 - 3719950 | 22727.2 |
| hypothetical protein | SAMN05444679_11362 | Not Available | Positive | 3719966 - 3721309 | 48856.2 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05444679_11363 | Not Available | Positive | 3721276 - 3722817 | 55699.9 |
| udp-glcnac3naca epimerase | SAMN05444679_11364 | Not Available | Positive | 3722915 - 3724006 | 39401.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444679_11365 | Not Available | Positive | 3724003 - 3725229 | 44901.1 |
| methyltransferase domain-containing protein | SAMN05444679_11366 | Not Available | Positive | 3725226 - 3725930 | 26417.9 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN05444679_11367 | Not Available | Positive | 3725935 - 3727098 | 42068.8 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN05444679_11368 | Not Available | Positive | 3727098 - 3727739 | 24007.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
