Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein phosphatase | SAMN05444679_11349 | Not Available | Positive | 3706251 - 3707060 | 28246.5 |
| fha domain-containing protein | SAMN05444679_11350 | Not Available | Positive | 3707090 - 3707740 | 22335.0 |
| ribonuclease bn, trna processing enzyme | SAMN05444679_11351 | Not Available | Positive | 3707931 - 3708737 | 29105.9 |
| type iv pilus assembly protein pila | SAMN05444679_11352 | Not Available | Positive | 3708866 - 3709402 | 18366.5 |
| protein glycosylation ligase | SAMN05444679_11353 | Not Available | Positive | 3709518 - 3711212 | 62594.6 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN05444679_11354 | Not Available | Positive | 3711170 - 3713191 | 73184.8 |
| udp-n-acetyl-d-galactosamine dehydrogenase | SAMN05444679_11355 | Not Available | Positive | 3713195 - 3714490 | 47391.7 |
| udp-n-acetyl-2-amino-2-deoxyglucuronate dehydrogenase | SAMN05444679_11356 | Not Available | Positive | 3714495 - 3715442 | 35326.8 |
| udp-2-acetamido-3-amino-2,3-dideoxy-glucuronate n-acetyltransferase | SAMN05444679_11357 | Not Available | Positive | 3715439 - 3716020 | 20638.7 |
| udp-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase | SAMN05444679_11358 | Not Available | Positive | 3716017 - 3717138 | 40774.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
