Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_11339 | Not Available | Positive | 3697717 - 3697914 | 7250.04 |
| two-component system, ompr family, sensor histidine kinase tcte | SAMN05444679_11340 | Not Available | Negative | 3697911 - 3699359 | 52580.5 |
| two component transcriptional regulator, winged helix family | SAMN05444679_11341 | Not Available | Negative | 3699376 - 3700047 | 24520.0 |
| dna-binding transcriptional regulator, marr family | SAMN05444679_11342 | Not Available | Negative | 3700072 - 3700482 | 14790.7 |
| recombination protein reca | SAMN05444679_11343 | Not Available | Positive | 3700705 - 3701769 | 37846.8 |
| regulatory protein | SAMN05444679_11344 | Not Available | Positive | 3701779 - 3702228 | 16581.8 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN05444679_11345 | Not Available | Negative | 3702259 - 3703188 | 33174.3 |
| succinyl-coa synthetase beta subunit | SAMN05444679_11346 | Not Available | Positive | 3703380 - 3704546 | 41161.7 |
| succinyl-coa synthetase (adp-forming) alpha subunit | SAMN05444679_11347 | Not Available | Positive | 3704556 - 3705449 | 31108.9 |
| integral membrane protein, yjbe family | SAMN05444679_11348 | Not Available | Positive | 3705539 - 3706222 | 23920.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
