Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial translation initiation factor 1 (bif-1) | SAMN05444679_11329 | Not Available | Negative | 3686374 - 3686643 | 10121.2 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_11330 | Not Available | Negative | 3687045 - 3688271 | 41174.2 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN05444679_11331 | Not Available | Positive | 3688354 - 3689805 | 52392.7 |
| serine protease, s1-c subfamily, contains c-terminal pdz domain | SAMN05444679_11332 | Not Available | Positive | 3689874 - 3690935 | 37587.5 |
| sugar phosphate isomerase/epimerase | SAMN05444679_11333 | Not Available | Negative | 3690940 - 3691998 | 39228.3 |
| putative glutamine amidotransferase | SAMN05444679_11334 | Not Available | Positive | 3692164 - 3693045 | 32674.0 |
| hypothetical protein | SAMN05444679_11335 | Not Available | Negative | 3693053 - 3693220 | 5382.55 |
| dna topoisomerase-3 | SAMN05444679_11336 | Not Available | Negative | 3693238 - 3696177 | 108403.0 |
| hypothetical protein | SAMN05444679_11337 | Not Available | Positive | 3696378 - 3696923 | 20309.0 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN05444679_11338 | Not Available | Positive | 3696926 - 3697714 | 28198.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
