Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_11319 | Not Available | Negative | 3678669 - 3678857 | 6986.5 |
| hippurate hydrolase | SAMN05444679_11320 | Not Available | Positive | 3678958 - 3680157 | 42830.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_11321 | Not Available | Positive | 3680194 - 3681168 | 33402.3 |
| hypothetical protein | SAMN05444679_11322 | Not Available | Negative | 3681165 - 3681482 | 11219.2 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN05444679_11323 | Not Available | Negative | 3681687 - 3682595 | 32077.9 |
| biphenyl-2,3-diol 1,2-dioxygenase | SAMN05444679_11324 | Not Available | Negative | 3682592 - 3683548 | 34834.9 |
| transcriptional regulator, tetr family | SAMN05444679_11325 | Not Available | Positive | 3683603 - 3684325 | 25926.7 |
| hypothetical protein | SAMN05444679_11326 | Not Available | Negative | 3684373 - 3684702 | 12352.6 |
| hypothetical protein | SAMN05444679_11327 | Not Available | Negative | 3684761 - 3684931 | 5994.47 |
| atp-independent rna helicase dbpa | SAMN05444679_11328 | Not Available | Negative | 3684966 - 3686363 | 50614.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
