Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05444679_1139 | Not Available | Positive | 3668763 - 3669665 | 32406.3 |
| membrane protein | SAMN05444679_11310 | Not Available | Positive | 3669775 - 3670977 | 42341.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_11311 | Not Available | Negative | 3670952 - 3671938 | 35234.0 |
| amidohydrolase, pncc family | SAMN05444679_11312 | Not Available | Negative | 3672172 - 3672675 | 18035.3 |
| short-chain dehydrogenase | SAMN05444679_11313 | Not Available | Negative | 3672662 - 3673480 | 29096.7 |
| two component transcriptional regulator, luxr family | SAMN05444679_11314 | Not Available | Positive | 3673707 - 3674339 | 23278.3 |
| esterase, phb depolymerase family | SAMN05444679_11315 | Not Available | Negative | 3674351 - 3675427 | 37275.0 |
| hypothetical protein | SAMN05444679_11316 | Not Available | Negative | 3675453 - 3675875 | 14603.0 |
| dna excision repair protein ercc-2 | SAMN05444679_11317 | Not Available | Positive | 3675955 - 3678279 | 85640.5 |
| hypothetical protein | SAMN05444679_11318 | Not Available | Positive | 3678351 - 3678659 | 10637.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
