Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdpmannose 4,6-dehydratase | SAMN05444679_112199 | Not Available | Negative | 3636124 - 3637161 | 38905.7 |
| methyltransferase, fkbm family | SAMN05444679_112200 | Not Available | Positive | 3637483 - 3640578 | 115975.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444679_112201 | Not Available | Positive | 3640676 - 3643078 | 88503.3 |
| glycosyl transferases group 1 | SAMN05444679_112202 | Not Available | Positive | 3643329 - 3644243 | 34136.9 |
| gdp-l-fucose synthase | SAMN05444679_112203 | Not Available | Positive | 3644298 - 3645254 | 35341.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444679_112204 | Not Available | Positive | 3645247 - 3647391 | 79802.1 |
| lipopolysaccharide transport system atp-binding protein | SAMN05444679_112205 | Not Available | Negative | 3647363 - 3648106 | 26337.0 |
| lipopolysaccharide transport system permease protein | SAMN05444679_112206 | Not Available | Negative | 3648113 - 3648916 | 30664.0 |
| mannose-1-phosphate guanylyltransferase | SAMN05444679_112207 | Not Available | Negative | 3648913 - 3650334 | 51725.8 |
| glycosyltransferase, gt2 family | SAMN05444679_112208 | Not Available | Positive | 3650449 - 3652446 | 73877.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
