Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase subunit j | SAMN05444679_101348 | Not Available | Positive | 329806 - 330453 | 23340.3 |
| nadh dehydrogenase subunit k | SAMN05444679_101349 | Not Available | Positive | 330450 - 330758 | 11178.3 |
| nadh dehydrogenase subunit l | SAMN05444679_101350 | Not Available | Positive | 330768 - 332804 | 74662.2 |
| nadh dehydrogenase subunit m | SAMN05444679_101351 | Not Available | Positive | 332832 - 334307 | 53581.8 |
| nadh dehydrogenase subunit n | SAMN05444679_101352 | Not Available | Positive | 334332 - 335819 | 52880.5 |
| protein of unknown function | SAMN05444679_101353 | Not Available | Positive | 335835 - 336140 | 11120.9 |
| adp-ribose pyrophosphatase | SAMN05444679_101354 | Not Available | Positive | 336142 - 336732 | 21698.6 |
| hypothetical protein | SAMN05444679_101355 | Not Available | Positive | 336743 - 337180 | 15628.6 |
| atp-binding cassette, subfamily b | SAMN05444679_101356 | Not Available | Negative | 337313 - 339115 | 63624.4 |
| transcriptional regulator, marr family | SAMN05444679_101357 | Not Available | Positive | 339174 - 339701 | 19390.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
