Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_112179 | Not Available | Negative | 3618030 - 3618860 | 30074.9 |
| transcriptional regulator, tetr family | SAMN05444679_112180 | Not Available | Negative | 3618881 - 3619588 | 27042.2 |
| poly(hydroxyalkanoate) granule-associated protein | SAMN05444679_112181 | Not Available | Negative | 3619634 - 3620101 | 16549.7 |
| dtdp-glucose 4,6-dehydratase | SAMN05444679_112182 | Not Available | Positive | 3620254 - 3621315 | 39606.5 |
| dtdp-4-dehydrorhamnose reductase | SAMN05444679_112183 | Not Available | Positive | 3621312 - 3622202 | 31898.1 |
| glucose-1-phosphate thymidylyltransferase | SAMN05444679_112184 | Not Available | Positive | 3622225 - 3623112 | 32199.5 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN05444679_112185 | Not Available | Positive | 3623109 - 3623657 | 20421.1 |
| cdp-glucose 4,6-dehydratase | SAMN05444679_112186 | Not Available | Positive | 3623654 - 3624739 | 39724.4 |
| nucleoside-diphosphate-sugar epimerase | SAMN05444679_112187 | Not Available | Positive | 3624736 - 3625566 | 29909.0 |
| dolichol-phosphate mannosyltransferase | SAMN05444679_112188 | Not Available | Positive | 3625563 - 3626546 | 36961.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
