Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp nucleosidase | SAMN05444679_112159 | Not Available | Negative | 3594949 - 3596457 | 56320.3 |
| nadph-glutathione reductase | SAMN05444679_112160 | Not Available | Negative | 3596507 - 3597862 | 48437.2 |
| fecr family protein | SAMN05444679_112161 | Not Available | Negative | 3597941 - 3600007 | 77418.3 |
| esterase, phb depolymerase family | SAMN05444679_112162 | Not Available | Negative | 3600134 - 3601090 | 34302.7 |
| tripartite atp-independent transporter, dctm component | SAMN05444679_112163 | Not Available | Negative | 3601101 - 3603014 | 68408.7 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05444679_112164 | Not Available | Negative | 3603011 - 3603670 | 24480.8 |
| trap-type mannitol/chloroaromatic compound transport system, substrate-binding protein | SAMN05444679_112165 | Not Available | Negative | 3603753 - 3604862 | 40719.9 |
| thiosulfate sulfurtransferase | SAMN05444679_112166 | Not Available | Positive | 3605044 - 3605508 | 16304.2 |
| bon domain-containing protein | SAMN05444679_112167 | Not Available | Negative | 3605513 - 3605977 | 16078.0 |
| type iii pantothenate kinase | SAMN05444679_112168 | Not Available | Positive | 3606099 - 3606872 | 27305.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
