Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN05444679_112149 | Not Available | Positive | 3584876 - 3585787 | 32596.3 |
| hypothetical protein | SAMN05444679_112150 | Not Available | Negative | 3585784 - 3587421 | 57872.8 |
| lipooligosaccharide transport system permease protein | SAMN05444679_112151 | Not Available | Negative | 3587456 - 3588217 | 28169.1 |
| lipooligosaccharide transport system atp-binding protein | SAMN05444679_112152 | Not Available | Negative | 3588314 - 3589288 | 35439.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_112153 | Not Available | Negative | 3589288 - 3590172 | 32661.7 |
| glutathione s-transferase | SAMN05444679_112154 | Not Available | Positive | 3590282 - 3590923 | 23336.2 |
| hypothetical protein | SAMN05444679_112155 | Not Available | Positive | 3590920 - 3591882 | 34103.8 |
| cytochrome p450 | SAMN05444679_112156 | Not Available | Negative | 3591889 - 3593043 | 40188.0 |
| transcriptional regulator, arsr family | SAMN05444679_112157 | Not Available | Positive | 3593095 - 3593787 | 24558.5 |
| putative tricarboxylic transport membrane protein | SAMN05444679_112158 | Not Available | Negative | 3593797 - 3594810 | 34921.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
