Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_112139 | Not Available | Negative | 3576243 - 3576470 | 8536.09 |
| arylformamidase | SAMN05444679_112140 | Not Available | Positive | 3576752 - 3577438 | 24557.9 |
| tcta family transporter | SAMN05444679_112141 | Not Available | Negative | 3577401 - 3578912 | 52815.2 |
| tripartite tricarboxylate transporter tctb family protein | SAMN05444679_112142 | Not Available | Negative | 3578926 - 3579414 | 17011.4 |
| rna recognition motif. (a.k.a. rrm, rbd, or rnp domain) | SAMN05444679_112143 | Not Available | Negative | 3579587 - 3579988 | 12903.9 |
| hypothetical protein | SAMN05444679_112144 | Not Available | Negative | 3580173 - 3580388 | 8092.07 |
| superfamily ii dna and rna helicase | SAMN05444679_112145 | Not Available | Positive | 3580428 - 3581669 | 44085.7 |
| citronellyl-coa dehydrogenase | SAMN05444679_112146 | Not Available | Negative | 3581664 - 3582824 | 42362.9 |
| mhyt domain-containing protein, no-binding membrane sensor | SAMN05444679_112147 | Not Available | Negative | 3582871 - 3583632 | 26106.9 |
| nucleoside-diphosphate-sugar epimerase | SAMN05444679_112148 | Not Available | Negative | 3583751 - 3584782 | 37151.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
