Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05444679_112129 | Not Available | Negative | 3562006 - 3562926 | 33789.3 |
| threonine synthase | SAMN05444679_112130 | Not Available | Positive | 3563024 - 3564181 | 40501.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_112131 | Not Available | Positive | 3564199 - 3565176 | 33706.0 |
| hemerythrin hhe cation binding domain-containing protein | SAMN05444679_112132 | Not Available | Negative | 3565191 - 3565718 | 19291.1 |
| gaf domain-containing protein | SAMN05444679_112133 | Not Available | Positive | 3565909 - 3571764 | 213289.0 |
| hpt (histidine-containing phosphotransfer) domain-containing protein | SAMN05444679_112134 | Not Available | Positive | 3571778 - 3572119 | 11934.0 |
| adenylate cyclase, class 3 | SAMN05444679_112135 | Not Available | Positive | 3572112 - 3573167 | 38078.3 |
| hypothetical protein | SAMN05444679_112136 | Not Available | Positive | 3573668 - 3574153 | 16344.3 |
| methyltransferase domain-containing protein | SAMN05444679_112137 | Not Available | Negative | 3574834 - 3575622 | 28198.5 |
| dna-binding protein h-ns | SAMN05444679_112138 | Not Available | Negative | 3575678 - 3576169 | 17828.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
