Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl esterase | SAMN05444679_112119 | Not Available | Positive | 3551822 - 3552763 | 33800.2 |
| transcriptional regulator, arac family | SAMN05444679_112120 | Not Available | Positive | 3552897 - 3553697 | 29291.1 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444679_112121 | Not Available | Positive | 3553709 - 3554584 | 30783.3 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444679_112122 | Not Available | Positive | 3554585 - 3555661 | 38522.2 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444679_112123 | Not Available | Positive | 3555774 - 3556586 | 29566.7 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444679_112124 | Not Available | Positive | 3556583 - 3557356 | 28551.7 |
| long-chain acyl-coa synthetase | SAMN05444679_112125 | Not Available | Positive | 3557361 - 3559238 | 69787.0 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_112126 | Not Available | Positive | 3559276 - 3560448 | 42832.6 |
| protein of unknown function | SAMN05444679_112127 | Not Available | Negative | 3560482 - 3561015 | 19062.2 |
| pseudouridine-5'-phosphate glycosidase | SAMN05444679_112128 | Not Available | Negative | 3561023 - 3561970 | 32540.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
