Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_112109 | Not Available | Negative | 3541123 - 3541764 | 20640.2 |
| molecular chaperone htpg | SAMN05444679_112110 | Not Available | Positive | 3542041 - 3544083 | 75158.0 |
| hypothetical protein | SAMN05444679_112111 | Not Available | Positive | 3544146 - 3545423 | 46614.5 |
| ser/thr protein kinase rdoa involved in cpx stress response, mazf antagonist | SAMN05444679_112112 | Not Available | Negative | 3545580 - 3546602 | 38498.4 |
| protein of unknown function | SAMN05444679_112113 | Not Available | Negative | 3546616 - 3547731 | 40529.6 |
| peroxiredoxin, ohr subfamily | SAMN05444679_112114 | Not Available | Negative | 3547828 - 3548256 | 14579.4 |
| dna-binding transcriptional regulator, marr family | SAMN05444679_112115 | Not Available | Negative | 3548321 - 3548773 | 16558.4 |
| enoyl-coa hydratase/carnithine racemase | SAMN05444679_112116 | Not Available | Negative | 3548863 - 3549678 | 29534.9 |
| 3-hydroxybutyryl-coa dehydrogenase | SAMN05444679_112117 | Not Available | Negative | 3549686 - 3550534 | 29803.8 |
| formate-dependent phosphoribosylglycinamide formyltransferase | SAMN05444679_112118 | Not Available | Positive | 3550594 - 3551796 | 42747.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
