Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05444679_11299 | Not Available | Positive | 3533103 - 3534029 | 34139.2 |
| hypothetical protein | SAMN05444679_112100 | Not Available | Positive | 3534244 - 3534615 | 12705.9 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN05444679_112101 | Not Available | Positive | 3534682 - 3535710 | 38040.3 |
| short chain dehydrogenase | SAMN05444679_112102 | Not Available | Positive | 3535730 - 3536026 | 10189.3 |
| hypothetical protein | SAMN05444679_112103 | Not Available | Positive | 3536103 - 3536432 | 10868.5 |
| hypothetical protein | SAMN05444679_112104 | Not Available | Negative | 3536439 - 3536801 | 13291.6 |
| hypothetical protein | SAMN05444679_112105 | Not Available | Negative | 3536967 - 3539084 | 74996.1 |
| hypothetical protein | SAMN05444679_112106 | Not Available | Negative | 3539081 - 3539908 | 29290.3 |
| hypothetical protein | SAMN05444679_112107 | Not Available | Negative | 3539905 - 3540375 | 17087.7 |
| hypothetical protein | SAMN05444679_112108 | Not Available | Negative | 3540372 - 3541031 | 22226.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
