Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_11279 | Not Available | Positive | 3511542 - 3511646 | 3675.62 |
| k+-transporting atpase atpase f chain | SAMN05444679_11280 | Not Available | Positive | 3511643 - 3511741 | 3452.36 |
| k+-transporting atpase atpase a chain | SAMN05444679_11281 | Not Available | Positive | 3511743 - 3513545 | 62504.1 |
| k+-transporting atpase atpase b chain | SAMN05444679_11282 | Not Available | Positive | 3513557 - 3515740 | 76604.9 |
| k+-transporting atpase atpase c chain | SAMN05444679_11283 | Not Available | Positive | 3515754 - 3516326 | 19723.9 |
| hypothetical protein | SAMN05444679_11284 | Not Available | Positive | 3516343 - 3516480 | 5416.78 |
| two-component system, ompr family, sensor histidine kinase kdpd | SAMN05444679_11285 | Not Available | Positive | 3516496 - 3519249 | 97957.4 |
| two-component system, ompr family, kdp operon response regulator kdpe | SAMN05444679_11286 | Not Available | Positive | 3519253 - 3519945 | 25401.4 |
| 23s rrna pseudouridine2604 synthase | SAMN05444679_11287 | Not Available | Positive | 3519956 - 3520723 | 28716.8 |
| isoquinoline 1-oxidoreductase, alpha subunit | SAMN05444679_11288 | Not Available | Positive | 3520788 - 3521285 | 17088.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
