Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444679_11269 | Not Available | Negative | 3501305 - 3502093 | 29343.6 |
| long-chain acyl-coa synthetase | SAMN05444679_11270 | Not Available | Negative | 3502090 - 3504042 | 70772.9 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444679_11271 | Not Available | Positive | 3504128 - 3504868 | 26928.3 |
| putative sos response-associated peptidase yedk | SAMN05444679_11272 | Not Available | Negative | 3504873 - 3505520 | 24403.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_11273 | Not Available | Positive | 3505618 - 3506382 | 26840.1 |
| b3/b4 domain-containing protein (dna/rna-binding domain of phe-trna-synthetase) | SAMN05444679_11274 | Not Available | Negative | 3506388 - 3507110 | 25709.7 |
| arac-type dna-binding protein | SAMN05444679_11275 | Not Available | Negative | 3507175 - 3508023 | 30370.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_11276 | Not Available | Negative | 3508026 - 3508988 | 34057.5 |
| hypothetical protein | SAMN05444679_11277 | Not Available | Negative | 3509145 - 3509357 | 7513.96 |
| kup system potassium uptake protein | SAMN05444679_11278 | Not Available | Negative | 3509496 - 3511370 | 67803.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
