Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_11249 | Not Available | Positive | 3482371 - 3483231 | 30783.2 |
| amino acid abc transporter membrane protein, paat family | SAMN05444679_11250 | Not Available | Positive | 3483242 - 3484045 | 29190.6 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05444679_11251 | Not Available | Positive | 3484047 - 3484835 | 28313.7 |
| uncharacterized conserved protein | SAMN05444679_11252 | Not Available | Positive | 3484832 - 3485206 | 13843.4 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN05444679_11253 | Not Available | Negative | 3485174 - 3486094 | 33973.1 |
| uncharacterized metalloenzyme ydcj, glyoxalase superfamily | SAMN05444679_11254 | Not Available | Positive | 3486285 - 3487673 | 50908.9 |
| fad/fmn-containing dehydrogenase | SAMN05444679_11255 | Not Available | Positive | 3487679 - 3489115 | 50147.7 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN05444679_11256 | Not Available | Positive | 3489125 - 3490318 | 42832.5 |
| transcriptional regulator, asnc family | SAMN05444679_11257 | Not Available | Positive | 3490377 - 3490838 | 16948.6 |
| hypothetical protein | SAMN05444679_11258 | Not Available | Positive | 3490890 - 3491534 | 23451.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
