Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444679_11239 | Not Available | Positive | 3470194 - 3471225 | 37467.3 |
| dihydroxyacetone kinase dhal subunit | SAMN05444679_11240 | Not Available | Positive | 3471222 - 3471854 | 22383.2 |
| dihydroxyacetone kinase dhak subunit | SAMN05444679_11241 | Not Available | Positive | 3471851 - 3472834 | 34522.5 |
| hypothetical protein | SAMN05444679_11242 | Not Available | Positive | 3472880 - 3473569 | 24357.4 |
| d-amino-acid dehydrogenase | SAMN05444679_11243 | Not Available | Negative | 3473606 - 3474862 | 45651.6 |
| muconate cycloisomerase | SAMN05444679_11244 | Not Available | Negative | 3475270 - 3476385 | 40363.0 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_11245 | Not Available | Negative | 3476454 - 3477284 | 29926.2 |
| aldehyde dehydrogenase (nad+) | SAMN05444679_11246 | Not Available | Negative | 3477348 - 3478853 | 53785.8 |
| acetolactate synthase-1/2/3 large subunit | SAMN05444679_11247 | Not Available | Negative | 3478908 - 3480659 | 63952.2 |
| saccharopine dehydrogenase, nadp-dependent | SAMN05444679_11248 | Not Available | Negative | 3480732 - 3481868 | 40937.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
