Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase | SAMN05444679_11219 | Not Available | Positive | 3451374 - 3453554 | 80148.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_11220 | Not Available | Negative | 3453551 - 3454471 | 32667.5 |
| doxx-like family protein | SAMN05444679_11221 | Not Available | Positive | 3454601 - 3454978 | 12794.2 |
| nad(p)h-dependent fmn reductase | SAMN05444679_11222 | Not Available | Positive | 3455017 - 3455604 | 21836.2 |
| redox-sensitive bicupin yhak, pirin superfamily | SAMN05444679_11223 | Not Available | Positive | 3455601 - 3456440 | 29653.2 |
| serine protease, s1-c subfamily, contains c-terminal pdz domain | SAMN05444679_11224 | Not Available | Positive | 3456522 - 3457505 | 33016.8 |
| hypothetical protein | SAMN05444679_11225 | Not Available | Negative | 3457512 - 3457760 | 8894.77 |
| hypothetical protein | SAMN05444679_11226 | Not Available | Negative | 3457769 - 3458080 | 11403.7 |
| 2-hydroxy-3-oxopropionate reductase | SAMN05444679_11227 | Not Available | Negative | 3458197 - 3459081 | 30207.0 |
| 4-hydroxy-2-oxoheptanedioate aldolase | SAMN05444679_11228 | Not Available | Negative | 3459097 - 3459891 | 28285.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
