Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_1129 | Not Available | Positive | 3440223 - 3440507 | 9794.89 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05444679_11210 | Not Available | Positive | 3440636 - 3441664 | 36845.8 |
| trap transporter, dctm subunit | SAMN05444679_11211 | Not Available | Positive | 3441669 - 3443540 | 65436.6 |
| transcriptional regulator, laci family | SAMN05444679_11212 | Not Available | Positive | 3443558 - 3444655 | 39417.6 |
| d-3-phosphoglycerate dehydrogenase | SAMN05444679_11213 | Not Available | Positive | 3444652 - 3445650 | 35175.6 |
| d-galactarolactone isomerase | SAMN05444679_11214 | Not Available | Positive | 3445647 - 3446471 | 29878.1 |
| dna end-binding protein ku | SAMN05444679_11215 | Not Available | Positive | 3446552 - 3447505 | 35381.5 |
| atp-dependent dna ligase ligd phosphoesterase module /atp-dependent dna ligase ligd polymerase module | SAMN05444679_11216 | Not Available | Positive | 3447514 - 3450054 | 92328.5 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN05444679_11217 | Not Available | Negative | 3450059 - 3450874 | 30701.7 |
| hypothetical protein | SAMN05444679_11218 | Not Available | Positive | 3451178 - 3451324 | 4851.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
