Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase yagt iron-sulfur-binding subunit | SAMN05444679_111226 | Not Available | Negative | 3430127 - 3430663 | 19239.0 |
| enoyl-(acyl carrier protein) reductase | SAMN05444679_111227 | Not Available | Negative | 3430786 - 3431007 | 7670.21 |
| hypothetical protein | SAMN05444679_1121 | Not Available | Negative | 3431008 - 3431254 | 8900.83 |
| type iv pilus assembly protein pilq | SAMN05444679_1122 | Not Available | Positive | 3431485 - 3433581 | 74566.7 |
| outer membrane protein (porin) | SAMN05444679_1123 | Not Available | Negative | 3433736 - 3434893 | 40128.3 |
| hypothetical protein | SAMN05444679_1124 | Not Available | Positive | 3435238 - 3436362 | 40144.7 |
| nuclease-related domain-containing protein | SAMN05444679_1125 | Not Available | Positive | 3436363 - 3437106 | 27469.2 |
| two-component system, ompr family, response regulator baer | SAMN05444679_1126 | Not Available | Positive | 3437126 - 3437866 | 27444.0 |
| two-component system, ompr family, sensor histidine kinase baes | SAMN05444679_1127 | Not Available | Positive | 3437924 - 3439471 | 56205.8 |
| two-component system, ompr family, response regulator baer | SAMN05444679_1128 | Not Available | Positive | 3439468 - 3440148 | 25373.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
