Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n6-l-threonylcarbamoyladenine synthase | SAMN05444679_101328 | Not Available | Positive | 310935 - 311987 | 36480.3 |
| hypothetical protein | SAMN05444679_101329 | Not Available | Negative | 311932 - 312675 | 27220.8 |
| molecular chaperone ibpa, hsp20 family | SAMN05444679_101330 | Not Available | Negative | 312883 - 313254 | 13661.3 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_101331 | Not Available | Positive | 313377 - 314660 | 46616.9 |
| aspartate/methionine/tyrosine aminotransferase | SAMN05444679_101332 | Not Available | Positive | 314681 - 315838 | 41568.1 |
| ssu ribosomal protein s15p | SAMN05444679_101333 | Not Available | Positive | 316050 - 316316 | 9889.12 |
| polyribonucleotide nucleotidyltransferase | SAMN05444679_101334 | Not Available | Positive | 316525 - 318816 | 83039.6 |
| nadph2:quinone reductase | SAMN05444679_101335 | Not Available | Positive | 318896 - 319894 | 34696.9 |
| triosephosphate isomerase | SAMN05444679_101336 | Not Available | Positive | 319906 - 320658 | 25824.0 |
| protein translocase subunit secg | SAMN05444679_101337 | Not Available | Positive | 320698 - 321129 | 13649.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
