Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_111206 | Not Available | Negative | 3407502 - 3408467 | 33469.4 |
| hypothetical protein | SAMN05444679_111207 | Not Available | Negative | 3408508 - 3408873 | 13231.1 |
| protein of unknown function | SAMN05444679_111208 | Not Available | Negative | 3408870 - 3410249 | 48614.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_111209 | Not Available | Positive | 3410340 - 3411251 | 33425.7 |
| dual specificity phosphatase, catalytic domain | SAMN05444679_111210 | Not Available | Positive | 3411315 - 3411845 | 20164.2 |
| indolepyruvate ferredoxin oxidoreductase | SAMN05444679_111211 | Not Available | Negative | 3412024 - 3415533 | 126549.0 |
| atp dependent helicase, lhr family | SAMN05444679_111212 | Not Available | Positive | 3415670 - 3420052 | 159216.0 |
| exodeoxyribonuclease-3 | SAMN05444679_111213 | Not Available | Negative | 3420082 - 3420882 | 29478.9 |
| response regulator receiver domain-containing protein | SAMN05444679_111214 | Not Available | Positive | 3421088 - 3421528 | 15347.7 |
| hypothetical protein | SAMN05444679_111215 | Not Available | Negative | 3421548 - 3421913 | 13646.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
