Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_03351 | SAMN05444679_111196 | Not Available | Negative | 3395080 - 3396024 | Not Available |
| iron complex outermembrane recepter protein | SAMN05444679_111197 | Not Available | Positive | 3396210 - 3398405 | 80198.2 |
| transcriptional regulator, iclr family | SAMN05444679_111198 | Not Available | Negative | 3398423 - 3399226 | 29064.0 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_111199 | Not Available | Positive | 3399405 - 3400172 | 27298.1 |
| amino acid abc transporter membrane protein, paat family | SAMN05444679_111200 | Not Available | Positive | 3400172 - 3400837 | 24056.3 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05444679_111201 | Not Available | Positive | 3400834 - 3401589 | 27361.3 |
| glycine/d-amino acid oxidase | SAMN05444679_111202 | Not Available | Positive | 3401586 - 3402884 | 46063.0 |
| transcriptional regulator, lysr family | SAMN05444679_111203 | Not Available | Negative | 3402881 - 3403831 | 34779.1 |
| beta-alanine--pyruvate transaminase | SAMN05444679_111204 | Not Available | Positive | 3403923 - 3405278 | 48158.6 |
| hypothetical protein | SAMN05444679_111205 | Not Available | Negative | 3405297 - 3407465 | 75768.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
