Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic-amino-acid transaminase | SAMN05444679_111186 | Not Available | Positive | 3382490 - 3383686 | 42697.3 |
| poly(3-hydroxybutyrate) depolymerase | SAMN05444679_111187 | Not Available | Positive | 3383783 - 3385171 | 52094.8 |
| electron transport complex protein rnfb | SAMN05444679_111188 | Not Available | Positive | 3385184 - 3385804 | 21851.1 |
| lactoylglutathione lyase | SAMN05444679_111189 | Not Available | Negative | 3385844 - 3386320 | 16877.6 |
| biotin synthase | SAMN05444679_111190 | Not Available | Negative | 3386317 - 3387354 | 36886.5 |
| propionyl-coa carboxylase alpha chain | SAMN05444679_111191 | Not Available | Negative | 3387351 - 3389408 | 74251.0 |
| propionyl-coa carboxylase carboxyltransferase subunit | SAMN05444679_111192 | Not Available | Negative | 3389424 - 3390956 | 56063.7 |
| lao/ao transport system kinase | SAMN05444679_111193 | Not Available | Negative | 3390953 - 3392038 | 38359.2 |
| methylmalonyl-coa mutase | SAMN05444679_111194 | Not Available | Negative | 3392041 - 3394200 | 78054.0 |
| transcriptional regulator, gntr family | SAMN05444679_111195 | Not Available | Positive | 3394308 - 3394973 | 24899.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
