Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 3373671 - 3373745 | Not Available |
| dna polymerase-3 subunit epsilon | SAMN05444679_111177 | Not Available | Negative | 3373832 - 3374551 | 26480.5 |
| ferredoxin, 2fe-2s | SAMN05444679_111178 | Not Available | Negative | 3374551 - 3374889 | 12306.6 |
| molecular chaperone hsca | SAMN05444679_111179 | Not Available | Negative | 3374898 - 3376754 | 64925.2 |
| molecular chaperone hscb | SAMN05444679_111180 | Not Available | Negative | 3376848 - 3377390 | 20684.4 |
| iron-binding apoprotein isca | SAMN05444679_111181 | Not Available | Negative | 3377428 - 3377751 | 11783.0 |
| fes assembly scaffold apoprotein iscu | SAMN05444679_111182 | Not Available | Negative | 3377753 - 3378166 | 14336.0 |
| cysteine desulfurase iscs | SAMN05444679_111183 | Not Available | Negative | 3378189 - 3379409 | 44961.1 |
| transcriptional regulator, badm/rrf2 family | SAMN05444679_111184 | Not Available | Negative | 3379490 - 3380026 | 19320.4 |
| excinuclease abc subunit b | SAMN05444679_111185 | Not Available | Negative | 3380247 - 3382379 | 80367.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
