Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, luxr family | SAMN05444679_111166 | Not Available | Positive | 3364884 - 3365516 | 23111.1 |
| methenyltetrahydrofolate cyclohydrolase /5,10-methylenetetrahydrofolate dehydrogenase (nadp+) | SAMN05444679_111167 | Not Available | Positive | 3365594 - 3366451 | 29833.6 |
| oligopeptidase a | SAMN05444679_111168 | Not Available | Positive | 3366486 - 3368534 | 75854.7 |
| glutaredoxin | SAMN05444679_111169 | Not Available | Positive | 3368595 - 3369218 | 21371.2 |
| ribose-5-phosphate isomerase | SAMN05444679_111170 | Not Available | Negative | 3369316 - 3370017 | 24532.5 |
| dihydroorotate oxidase a | SAMN05444679_111171 | Not Available | Positive | 3370058 - 3371125 | 37882.8 |
| uncharacterized membrane protein yqje | SAMN05444679_111172 | Not Available | Negative | 3371142 - 3371831 | 25406.0 |
| membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, elab/yqjd/duf883 family | SAMN05444679_111173 | Not Available | Negative | 3371874 - 3372182 | 10641.8 |
| l-2-hydroxyglutarate oxidase lhgo | SAMN05444679_111174 | Not Available | Negative | 3372276 - 3373373 | 37862.6 |
| hypothetical protein | SAMN05444679_111175 | Not Available | Negative | 3373407 - 3373553 | 4901.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
