Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate dehydrogenase e2 component | SAMN05444679_111145 | Not Available | Negative | 3337129 - 3338403 | 44023.4 |
| 2-oxoglutarate dehydrogenase e1 component | SAMN05444679_111146 | Not Available | Negative | 3338455 - 3341340 | 106707.0 |
| propionyl-coa synthetase | SAMN05444679_111148 | Not Available | Negative | 3341508 - 3343418 | 69250.9 |
| transcriptional regulator, arac family | SAMN05444679_111149 | Not Available | Negative | 3343907 - 3344716 | 30833.3 |
| conserved hypothetical protein, steroid delta-isomerase-related | SAMN05444679_111150 | Not Available | Positive | 3344946 - 3345452 | 18153.0 |
| nadph2:quinone reductase | SAMN05444679_111151 | Not Available | Positive | 3345464 - 3346456 | 34428.1 |
| hypothetical protein | SAMN05444679_111152 | Not Available | Negative | 3346572 - 3347168 | 21701.8 |
| hypothetical protein | SAMN05444679_111153 | Not Available | Positive | 3347251 - 3347763 | 17937.7 |
| isocitrate dehydrogenase (nad+) | SAMN05444679_111154 | Not Available | Negative | 3347808 - 3348839 | 36285.1 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN05444679_111155 | Not Available | Positive | 3348925 - 3350064 | 41116.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
