Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine2605 synthase | SAMN05444679_111135 | Not Available | Negative | 3326375 - 3328009 | 58902.9 |
| condensin subunit scpb | SAMN05444679_111136 | Not Available | Negative | 3328006 - 3328791 | 28822.7 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN05444679_111137 | Not Available | Negative | 3328921 - 3329946 | 37011.5 |
| beta-barrel assembly machine subunit bamd | SAMN05444679_111138 | Not Available | Positive | 3329961 - 3330770 | 30525.2 |
| atp-dependent dna helicase ding | SAMN05444679_111139 | Not Available | Negative | 3330808 - 3332808 | 72523.9 |
| hypothetical protein | SAMN05444679_111140 | Not Available | Negative | 3332808 - 3333089 | 11015.4 |
| serine/threonine protein phosphatase prpc | SAMN05444679_111141 | Not Available | Positive | 3333101 - 3333916 | 29411.3 |
| hypothetical protein | SAMN05444679_111142 | Not Available | Negative | 3333938 - 3334588 | 24854.0 |
| cell division protein zape | SAMN05444679_111143 | Not Available | Negative | 3334585 - 3335682 | 42007.5 |
| dihydrolipoamide dehydrogenase | SAMN05444679_111144 | Not Available | Negative | 3335687 - 3337117 | 50275.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
